PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G30770.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 896aa    MW: 100372 Da    PI: 7.4851
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G30770.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.53.1e-505266541129
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      lppGfrFhPtd el v+yLk+k+ gk+l++ ++++e+d+yk+ PwdLp k +++++++ewyfF++rd+ky++g+r+nr+t++gyWkatgkd++v
  OGLUM04G30770.1 526 LPPGFRFHPTDVELTVYYLKRKLLGKHLRC-NAVSELDLYKFAPWDLPeKsSLQSKDREWYFFCPRDRKYSSGSRTNRSTEAGYWKATGKDRPV 618
                      79****************************.89**************95357788999************************************ PP

              NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                      +  ++++vg+k+tLvf+ g+ p+g +tdWvm eyrle
  OGLUM04G30770.1 619 IY-NSQTVGMKRTLVFHLGKPPRGDRTDWVMYEYRLE 654
                      **.999*****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF030164.6E-4253340IPR004263Exostosin-like
SuperFamilySSF1019417.85E-61514676IPR003441NAC domain
PROSITE profilePS5100556.488526676IPR003441NAC domain
PfamPF023656.8E-26527653IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005768Cellular Componentendosome
GO:0005802Cellular Componenttrans-Golgi network
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 896 aa     Download sequence    Send to blast
MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY  60
AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY  120
VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR  180
SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR  240
AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL  300
RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM  360
IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH  420
EWRTPKGPWG REIWGGGGGR ATATGAACLS PLRAASFQFH LAASPRQHTS VLRPIPLSSP  480
LNLSSLPCRT ASASAPPSPL RGGAAFPSLA DRHHQLLRPS MAKTSLPPGF RFHPTDVELT  540
VYYLKRKLLG KHLRCNAVSE LDLYKFAPWD LPEKSSLQSK DREWYFFCPR DRKYSSGSRT  600
NRSTEAGYWK ATGKDRPVIY NSQTVGMKRT LVFHLGKPPR GDRTDWVMYE YRLEDKELSA  660
SGVKLDACVL CKIFQKSGPG PKIGEQYGAP FNEDDWNEAN GELSSFAFSV PPCALESSNG  720
RLNTAGQQLA VSDNIGSSLD HCSETNDKIA VGGCGTTSPS VPFDTIHTQQ LAEIISCFST  780
DLLNSVSRDG SLPDSTADYD NDNEVSSDDG EAIFNELDEL DSQSDESISN HCNSCGEDLI  840
PPTLEVLKTE QYLELNDLSF SLADDPDPCN LLLTTNLSDQ NHPELETSSN RKALRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-495186777169Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0646460.0AK064646.1 Oryza sativa Japonica Group cDNA clone:002-114-D03, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9ZSW70.0A0A0D9ZSW7_9ORYZ; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP993277
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.42e-77NAC domain containing protein 82